CDS

Accession Number TCMCG057C53778
gbkey CDS
Protein Id XP_018459627.1
Location join(93828..94151,94357..94536,94629..94683,94793..94920,95074..95157,95243..95368,95453..95578)
Gene LOC108830532
GeneID 108830532
Organism Raphanus sativus

Protein

Length 340aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018604125.1
Definition PREDICTED: 50S ribosomal protein L1, chloroplastic [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the universal ribosomal protein uL1 family
KEGG_TC -
KEGG_Module M00178        [VIEW IN KEGG]
M00179        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE br01610        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03011        [VIEW IN KEGG]
KEGG_ko ko:K02863        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03010        [VIEW IN KEGG]
map03010        [VIEW IN KEGG]
GOs GO:0000470        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005840        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009534        [VIEW IN EMBL-EBI]
GO:0009535        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0015934        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022625        [VIEW IN EMBL-EBI]
GO:0022626        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031976        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034357        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042273        [VIEW IN EMBL-EBI]
GO:0042651        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044391        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044436        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044445        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGTCTGCGCAACCCACAGCTCCGCTCTCATGATAGCATACGCCGCATCAAAGGACCTTACAATCCCGTCTCTTTTCTCATATGCGAACCCAAGACCCAACAACTTGAGCGTCGCACTCTGTCCCCCTCTTGTTCTCCTTGGGGCTAGAAGAGGCTCCAACCGATCCTTCCCGGTAGTTGTCTCAGCCGTCGCAGCAGAGGCTGATGTAGACACTGAGGAGGACGCGGAGCAGAATGAAGCCACGTCCACCGCCACAGCCGTCCTTGATCCGCCGAAGCCTAAGAAAGGAAAAGCCGCTTTGCTTCTCAAGAGAGATAGAACAAGGTCTAAGAGGTTTCTGGAAATCCAAAAGCTAAGGGAAACCAAAAAGGAGTACGACGTCAAGACTGCTGTATCTTTGCTCAAGCAAACCGCTAACACAAGGTTTGTGGAGTCGGTTGAAGCCCATTTCCGTCTCAACATCGATCCAAAGTACAACGATCAGCAGCTCCGAGCAACGGTGAGCCTTCCTAAAGGAACAGGACAAACTGTTAAAGTGGCTGTTCTTGCACAAGGTGAGAAGGTCGATGAAGCAAAAAATGCAGGGGCAGATATTGTGGGCAGTGATGATTTGATTGAACAGATAAAAGGAGGGTTCATGGAGTTCGATAAGTTAATTGCATCCCCGGATATGATGGTCAAGGTTGCTGGCCTTGGAAAGATTCTTGGTCCTCGAGGACTCATGCCAAATCCCAAGGCTGGTACCGTCACAGCTAACATTCCACAGGCTATAGAGGAGTTCAAGAAGGGAAAAGTAGAATTCAGAGCAGACAAAACTGGGATTGTTCACATTCCCTTTGGGAAAGTTAATTTCACAGAGGAAGACCTGCTCGTAAACTTCCTAGCAGCAGTGAAATCGGTGGAGACAAACAAGCCAAAGGGAGCAAAAGGAGTGTACTGGAAAAGCGCACACATATGCTCGTCAATGGGGCCATCCATCAAGTTGAACATAAGGGAGATGATAGACTTCAAGCCATAA
Protein:  
MAVCATHSSALMIAYAASKDLTIPSLFSYANPRPNNLSVALCPPLVLLGARRGSNRSFPVVVSAVAAEADVDTEEDAEQNEATSTATAVLDPPKPKKGKAALLLKRDRTRSKRFLEIQKLRETKKEYDVKTAVSLLKQTANTRFVESVEAHFRLNIDPKYNDQQLRATVSLPKGTGQTVKVAVLAQGEKVDEAKNAGADIVGSDDLIEQIKGGFMEFDKLIASPDMMVKVAGLGKILGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGIVHIPFGKVNFTEEDLLVNFLAAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREMIDFKP